You can setup multiple Jira integrations for a single program. Each integration is unique and can be customized based on the requirements.
To add an additional Jira integration:
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On the Integrations page, in Atlassian Jira, click Configure.

The Jira Integrations page displays the existing Jira integrations.
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Click Add Jira integration.

The Jira integration created message and the Authorization page is displayed. To proceed, see authorizing Crowdcontrol to access Jira.